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Colorado Cystic Fibrosis Research & Development Program


Population Genomics of Nontuberculous Mycobacteria Recovered from United States Cystic Fibrosis Patients.
Nabeeh A. Hasan*, Rebecca M. Davidson*, L. Elaine Epperson, Sara M. Kammlade, Rachael R. Rodger, Adrah R. Levin, Alyssa Sherwood, Scott D. Sagel, Stacey L. Martiniano. Charles L. Daley, Max Salfinger, Jerry A. Nick, Michael Strong. bioRxiv doi: 10.1101/663559 (2019) .

Mycobacterial biomaterials and resources for researchers
Manzour Hernando Hazbon, Leen Rigouts, Marco Schito, Matthew Ezewudo, Takuji Kudo, Takashi Itoh, Moriya Ohkuma, Katalin Kiss, Linhuan Wu, Juncai Ma, Moriyuki Hamada, Michael Strong, Max Salfinger, Charles L Daley, Jerry A Nick, Jung-Sook Lee, Nalin Rastogi, David Couvin, Raquel Hurtado-Ortiz, Chantal Bizet, Anita Suresh, Timothy Rodwell, Audrey Albertini, Karen A Lacourciere, Ana Deheer-Graham, Sarah Alexander, Julie E Russell, Rebecca Bradford, Marco A Riojas. Pathogens and Disease (2018).

Microbiology: Bacterial transmission tactics. Michael Strong and Rebecca M. Davidson. Nature, 543: 495-496 (2017).

Mycobacterium abscessus displays fitness for fomite transmission.
Kenneth Malcolm, Silvia Caceres, Jennifer Honda, Rebecca Davidson, L. Epperson, Michael Strong, Edward Chan, and Jerry Nick. 83: e00562-17, Applied and Environmental Microbiology (2017).

A Geospatial Epidemiologic Analysis of Nontuberculous Mycobacterial Infection: An Ecological Study in Colorado
Ettie M. Lipner, David Knox, Joshua French, Jordan Rudman, Michael Strong, James L. Crooks. Annals of the American Thoracic Society 14:1523-1532 (2017).

Mycobacterium talmoniae sp. nov., a slowly growing mycobacterium isolated from human respiratory samples.
Rebecca M. Davidson, Mary Ann De Groote, Jamie Marola, Sarah Buss, Victoria Jones, Michael R. McNeil, Alison G. Freifeld, L. Elaine Epperson, Nabeeh A. Hasan, Mary Jackson, Peter C. Iwen, Max Salfinger, Michael Strong. International Journal of Systematic and Evolutionary Microbiology 67:2640-2645 (2017).

Environmental Nontuberculous Mycobacteria in the Hawaiian Islands
Jennifer R. Honda, Nabeeh A. Hasan, Rebecca M. Davidson, Myra D. Williams, L. Elaine Epperson, Paul R. Reynolds, Terry R. Smith, Elena Iakhiaeva, Matthew J. Bankowski, Richard J. Wallace Jr., Edward D. Chan, Joseph O. Falkinham III, Michael Strong. PLOS Neglected Tropical Diseases, 10(10): e0005068. (2016).

Network Analysis of Human Genes Influencing Susceptibility to Mycobacterial Infections
Ettie Lipner, Benjamin J. Garcia, Michael Strong. PLOS ONE. 11: e0146585, (2016).

MycoBASE: expanding the functional annotation coverage of mycobacterial genomes.
Benjamin J. Garcia, Gargi Datta, Rebecca M. Davidson, Michael Strong. BMC Genomics 16:1102, (2015).

Draft Genome Sequence of Mycobacterium chelonae Type Strain ATCC 35752.
Nabeeh A. Hasan, Rebecca M. Davidson, Vinicius Calado Nogueira de Moura, Benjamin J. Garcia, Paul R. Reynolds, L. Elaine Epperson, Eveline Farias-Hesson, Mary Ann DeGroote, Mary Jackson, Michael Strong. Genome Announcements, e00536. (2015).

Power and Limitations of Whole Genome Sequencing in Mycobacteria.
Michael Strong. NTM-TB Insights. May (2015).

Genome sequencing of Mycobacterium abscessus isolates from patients in the United States and comparisons to globally diverse clinical strains.
Rebecca M. Davidson, Nabeeh A. Hasan, Paul R. Reynolds, Sarah Totten, Benjamin Garcia, Adrah Levin, Preveen Ramamoorthy, Leonid Heifets, Charles L. Daley, and Michael Strong. Journal of Clinical Microbiology, 52:3573-3582 (2014).